FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007926284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences485372
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12600.25959470261984624No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9810.20211301846830887No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9510.19593219221545535No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8790.181098209208607No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7780.16028942749066696No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5510.11352117551074227No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)