FastQCFastQC Report
Wed 31 May 2023
EGAF00007926326

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926326
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences437585
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG56941.3012329033216403No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT21590.4933898556851812No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17680.4040357873327468No Hit
GTGAGCGATGCCGTCGCTAACGGCCTGAAGG12150.27766034027674624No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA10800.24680919135710777No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT9970.22784144794725597No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA9920.22669881280208415No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6410.14648582561102413No Hit
AACGGTGACATGGCTACCGGCTGGGTGAAGG5650.12911777140441286No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5000.11426351451717953No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA4890.11174971719780157No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4650.10626506850097694No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)