FastQCFastQC Report
Sun 21 May 2023
EGAF00007926336

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926336
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences356664
Sequences flagged as poor quality0
Sequence length31
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47621.3351501693470607No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT24040.6740237310185496No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC22170.6215934324742615No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT15030.42140501985061574No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG14640.4104703586568872No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA13670.3832738936365879No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG8990.2520579593118453No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8370.23467465177309738No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC8160.22878675728416664No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG6530.18308548101294214No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG6360.1783190902361887No Hit
CCTCGTCGTCCGCCGCCAGGCCGTCGCCCGT5870.1645806697620169No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC5380.15084224928784515No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT5170.1449543547989144No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC4770.1337393176771415No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC4620.1295336787564767No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG4570.12813179911625508No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC4470.12532803983581184No Hit
CACCCAGGTGTGCCGGTCTCTCCAGCCGTTA4450.12476728797972321No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA4440.12448691205167889No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC3970.11130924343359576No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC3830.10738398044097526No Hit

[OK]Adapter Content

Adapter graph