FastQCFastQC Report
Sun 21 May 2023
EGAF00007926360

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926360
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences579157
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT23300.4023088730689605No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT21370.368984575857669No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT11760.2030537488107715No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10730.18526927931459No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA9230.15936956645607323No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG8240.14227575596945216No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA7650.13208853557843556No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG6730.11620337835854526No Hit
ATGGTTGGTGGTGAAGCCGGCAAAGAAGCGG6400.11050544152967157No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG6360.10981478252011112No Hit
CACAAAGCAAAACACATCAAGGCCTGGTGCC6240.10774280549142978No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)