FastQCFastQC Report
Wed 31 May 2023
EGAF00007926382

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926382
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences608363
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT30710.5047973002960403No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT26770.4400333353606317No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA16210.26645275929009493No Hit
GAACGTACCACTGACGGTAAACTGGATCCGC11960.19659315244352468No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10760.17686808698096368No Hit
GCTAACACCCTGAACGGTGAAAACGTACGTA7440.12229540586787821No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG7020.11539163295598187No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCT6580.10815910895304284No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG6180.10158408713218917No Hit
ACTCCGTCTGACGCAGGCGAAACGGTCGCGG6180.10158408713218917No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)