FastQCFastQC Report
Sun 21 May 2023
EGAF00007926416

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926416
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences540690
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT45040.8330096728254638No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9090.16811851523053875No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC8490.15702158353215334No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8310.15369250402263773No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6810.12595017477667425No Hit
ATGCAGACCGCGACCCCGACCAACTTCAACG5840.10801013519761786No Hit
GAAAGCGTCGAACGTGCTATGGGTCGTGTTG5820.10764023747433835No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG5640.10431115796482272No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG5480.10135197617858663No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)