FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926462

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926462
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences528187
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42180.7985808056616313No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACC17860.3381378186134835No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA14310.2709267740402547No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14260.2699801396096458No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC11640.22037649544574175No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC11590.2194298610151329No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG11590.2194298610151329No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG10340.19576400024991147No Hit
ATCGAAGTGATTGACGTTGAAACCACTGAAG9150.1732341008014207No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9140.17304477391529893No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7150.13536872357706647No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6880.13025689765177864No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6680.1264703599293432No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA6600.12495574484036903No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6530.12363045663751664No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6490.12287314909302956No Hit
AACGGTGACATGGCTACCGGCTGGGTGAAGG5840.11056690149511442No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC5670.10734834443104431No Hit
ACCCTGTCCCTGTCTCAGCTGTACTCCCACA5440.10299382605024356No Hit
GCGGAAGTGAATGTTGACCAGGCTCACCTGG5300.10034324964453877No Hit

[OK]Adapter Content

Adapter graph