FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007926477

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926477
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences537737
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGGACGGACATCTGAGACGGGGAACGCGGTGGGTTCGGGGTCC19470.3620729092474574No Hit
CGGCGCACCGTGGTTGATCGGCTGGGTCAGCGGCAGGTCGAAGT11920.22166970098765754No Hit
GATAACGAAGCTAGCGGAGGTCGGGGTAATGACCACAGAGGACG9930.1846627626516308No Hit
GAAGATGTAATCCCAGGACTCATCCAGGTCAGCCGGATCGATAG8460.1573259790566764No Hit
CGGCGGCGGTTCCTGATAACCCTGGTACGGGGCTTGCGGAGCCG6890.12812955031920809No Hit
CTGAACAACATCGGTACCCTGAGAAGGCGGTGCGCCCTGAAACA6160.11455414077885659No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT6150.11436817626460519No Hit
TGGCGGCGGTTCCTGGTAGCCCTGATACGGTGCCTGCGGCGCCG5920.11009099243682322No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)