FastQCFastQC Report
Sun 21 May 2023
EGAF00007926480

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926480
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences416026
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22570.5425141697874651No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12380.29757755524895074No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA7350.1766716503295467No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5510.13244364534908876No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4900.1177811002196978No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4480.1076855773437237No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)