FastQCFastQC Report
Wed 31 May 2023
EGAF00007926482

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926482
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences401585
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG59001.4691783806666086No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12700.31624687177060895No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA6610.1645977812916319No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5250.1307319745508423No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4670.11628920402903493No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4410.10981485862270753No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)