FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926506

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926506
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences426832
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT17260.4043745548599918No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG15610.3657176594069798No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14400.33736926940810436No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12690.29730666866589195No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA10010.23451849908160588No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC9250.2167128987517337No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7990.18719308767852458No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7120.16681036098511826No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG5380.12604490759830564No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCT4370.10238220189676502No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)