FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926523

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926523
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences427519
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT14960.3499259682025828No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA12160.2844318030309764No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA10880.25449161323824204No Hit
ACGATCGCCGAAGCGGCTGGATTTGGAAGTACCGGTGCCGAAAC9940.23250428635920276No Hit
GGACTGGTCCGGCAGGGTATCCGGGAAAGCCGCACGTGCCGCAC8960.2095813285491405No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT8770.2051370816267815No Hit
ACGAACAATCACCTTAATTGCTTTGCCGTTAACTTTAACTACGT5850.13683602366210626No Hit
TGGTGCCTGAGACTCGTTCAGTTTCTTAGCTTCGCCCAGGACGT5760.1347308540673046No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)