FastQCFastQC Report
Wed 31 May 2023
EGAF00007926524

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926524
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences427519
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG62981.4731509008956327No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT28240.6605554373022018No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14810.34641735221124675No Hit
TTCGGCGGTGGCATCGAAGCACTGGATGGCG10020.23437554822124865No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG9170.214493390937011No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8850.2070083434888274No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA6040.14128027058446527No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA5700.13332740767077017No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)