FastQCFastQC Report
Wed 31 May 2023
EGAF00007926528

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926528
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences469398
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG69631.4833893625452175No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18780.4000869198420104No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10860.2313601677041658No Hit
GAAGAGGCTCCGGCAGTTGATCCAGTGCAGG6880.1465707139783297No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG6540.13932739381079595No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG6180.13165799598634848No Hit
GATGGTTACATCTTCAACCCGAAAGACATCG5800.12356252050498724No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC5470.11653223916591036No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5150.10971499665529039No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC4940.10524118125769602No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG4930.10502814242923915No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)