FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007926529

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926529
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences422508
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACCGCCGGCGGGCCGGTATCGCTTGGGGATACGGTTGGCGGTG16630.3936020146364093No Hit
TTTCAGGGACGGTACGCCGACACGAGAACCGCGACCTTTAACTG8780.20780671608584927No Hit
GGTAGAAGCGGCGCGGGAGCTACCAGACAGGCGACCCGGTGCGG8380.19833943972658508No Hit
CGGATGAGTTTTCGGAGTCGGCCACGGCAGTTTACGCGGCTTCT6440.15242314938415366No Hit
AGGGTGGGTCTTCGGGGTCGGCCACGGCAGTTTACGCGGTTTTT6240.14768951120452156No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT5240.12402132030636107No Hit
CGGCGCACCGTGGTTGATCGGCTGGGTCAGCGGCAGGTCGAAGT5130.1214178193075634No Hit
CGGGTGGGTTTTCGGGGTCGGCCAAGGCAGTTTACGCGGCTTTT4320.10224658468005339No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)