FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926531

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926531
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences393524
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACCGCCGGCGGGCCGGTATCGCTTGGGGATACGGTTGGCGGTG14920.37913824823898923No Hit
TTTCAGGGACGGTACGCCGACACGAGAACCGCGACCTTTAACTG8090.20557831288561818No Hit
GGTAGAAGCGGCGCGGGAGCTACCAGACAGGCGACCCGGTGCGG7270.18474095607891766No Hit
AGGGTGGGTCTTCGGGGTCGGCCACGGCAGTTTACGCGGTTTTT6290.1598377735538366No Hit
CGGATGAGTTTTCGGAGTCGGCCACGGCAGTTTACGCGGCTTCT6010.1527225785466706No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT4880.12400768441060775No Hit
CGGCGCACCGTGGTTGATCGGCTGGGTCAGCGGCAGGTCGAAGT4260.10825260975188299No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)