FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007926532

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926532
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences393524
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG65941.675628424187597No Hit
ATCGAAGTGATTGACGTTGAAACCACTGAAG14190.3605879183988778No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG7810.1984631178784521No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7480.19007735233429218No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7160.18194570089753104No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT5920.1504355515800815No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT5560.1412874437137252No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4620.11740071761823931No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA4240.10774438153708542No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)