FastQCFastQC Report
Sun 21 May 2023
EGAF00007926548

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926548
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences431700
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22390.5186472087097521No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT19200.44475330090340515No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5130.11883252258512857No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4920.11396803335649756No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4790.11095668288163077No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)