FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926550

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926550
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences440282
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT21030.4776484162423174No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15070.34228062923308245No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5270.1196960130098437No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4660.10584125628574413No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4510.10243434889457212No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4430.10061733161928037No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)