FastQCFastQC Report
Wed 31 May 2023
EGAF00007926551

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926551
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences561652
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT10360.1844558552270801No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC8920.1588172035352852No Hit
CTGTGCGCGGTCGCCGCTACCCGGAGACACCAGACCGCCCGGCA7580.13495901376653158No Hit
CATATCCGGTTCACCGTCCGGGCCACCTTCCTGGTGATATTCGA7520.13389073661270678No Hit
GGTGGATGGGCCTTCACCAGGATCGTCAGCCGGGCCCTGCTCGA5990.1066496691901747No Hit
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT5970.10629357680556643No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT5630.10024000626722596No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)