FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926554

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926554
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences564531
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12320.21823425108629993No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11690.20707454506484146No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10680.18918358779234443No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9800.17359542700046587No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA8590.15216170591163283No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG7880.1395848943636399No Hit
CTGATGCGTATGAAGGAAGTATCTAGCGTTT7450.13196795215851742No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6920.12257962804522692No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT6770.1199225551829749No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5680.10061449238394349No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)