FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926652

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926652
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences487469
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10240.21006464000787742No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9300.1907813625071543No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT5870.12041791375451567No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5040.10339119000387718No Hit
ATCCAGGGCAAACTGGAATACCGTCACACCT5030.10318604875386948No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG5010.1027757662538541No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)