FastQCFastQC Report
Sun 21 May 2023
EGAF00007926680

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926680
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences529224
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17460.3299170105664142No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10170.19216815563920003No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9940.18782216981845118No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7200.13604825177996463No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)