FastQCFastQC Report
Wed 31 May 2023
EGAF00007926682

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926682
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences531014
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17410.3278632955063332No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10590.1994297702132147No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10010.18850727099473835No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6850.12899848214924653No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5520.10395206152756802No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)