FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007926684

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926684
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences516213
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG46490.9005972340874795No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17270.3345518226003607No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9900.1917812995798246No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6800.13172856940836436No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5380.1042205446201471No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)