FastQCFastQC Report
Wed 31 May 2023
EGAF00007926698

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926698
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences453277
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43450.9585749993933069No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17060.37637029895626734No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC14030.30952375699627377No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG9900.2184094935326522No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT8170.18024298607694633No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6250.13788478127061377No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6210.13700231867048185No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6090.13435493087008604No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG5840.1288395396192615No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC5220.11516136931721663No Hit

[OK]Adapter Content

Adapter graph