FastQCFastQC Report
Wed 31 May 2023
EGAF00007926700

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926700
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467057
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9850.21089502994281212No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9410.20147433824993524No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6230.13338843010596138No Hit
ATGTCTTCTCGCCGCCGTAGCTCTTCCCGTC5360.11476115334959117No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA5220.11176366053822125No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT4960.10619688817424854No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)