FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007926734

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926734
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences485356
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT46810.9644467154006544No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG44440.9156165783466157No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA20130.4147471134589868No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC19630.40444539678091956No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG14160.291744616322864No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT10660.21963259957639342No Hit
ATCGAAGTGATTGACGTTGAAACCACTGAAG10290.21200932923462365No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA10190.2099489858990102No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA8740.18007400753261524No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC7760.15988264284360346No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7680.15823436817511272No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA7350.15143523516758833No Hit
ATGGCACGTCGCCTGCCGAAACCGACTCTGC6010.12382663447036814No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG5750.11846974179777318No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)