FastQCFastQC Report
Sun 21 May 2023
EGAF00007926750

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926750
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences468591
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41760.8911822890324397No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA13750.2934328657613996No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6370.1359394439927357No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5740.12249488359784971No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT5160.11011735180573251No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA4810.10264815158635143No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)