FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926770

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926770
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences533552
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11010.2063528953129217No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8820.16530722403814438No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8650.16212103037754522No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7030.13175847902360033No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5400.1012085045131496No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)