FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926772

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926772
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences515065
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG46390.9006630231135876No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8080.15687340432760913No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7960.15454360129304068No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6360.12347956083212798No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)