FastQCFastQC Report
Wed 31 May 2023
EGAF00007926776

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926776
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences513916
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG48150.9369235439254664No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12560.24439791716934284No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9820.19108181103526647No Hit
ACTAGCCCGGAAGAACCGATCTACACCCAGG8960.17434755874500893No Hit
CCGGATTTTGAACAGAACATTGCGACCACCA6510.12667439815067055No Hit
ATGATGGACCCGAACTCTACCAGCGAAGACG6420.12492313919006219No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6220.12103145261093252No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA5590.10877263988667409No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)