FastQCFastQC Report
Wed 31 May 2023
EGAF00007926778

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926778
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences528808
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT22150.4188665829563849No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10130.19156291130240086No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8200.15506573274231858No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7520.14220662319783361No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6320.11951407694286018No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5510.1041966082207531No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)