FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926786

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926786
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences438366
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG35990.8210034537350068No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12130.27670941633247104No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG10100.2304010803757591No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8410.19184882039209245No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT6500.14827792301410236No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6270.14303116573821875No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG4600.10493514551767244No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)