FastQCFastQC Report
Wed 31 May 2023
EGAF00007926802

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926802
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences444415
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT57981.304636432163631No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG35870.8071284722612874No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA25310.569512730218377No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG19870.4471046206811201No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG17180.38657561063420454No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC13850.3116456465240822No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13760.3096205123589438No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC13540.3046701843997165No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG12300.2767683359022535No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC11690.26304242656075966No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTC9390.21128899789611064No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG9030.20318846123555684No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC8400.18901252207958777No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT8350.18788744754339975No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7610.17123634440781701No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC7570.17033628477886661No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6700.150759987849195No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC6680.1503099580347198No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC6290.14153437665245322No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6030.1356839890642755No Hit
AGCCCGGCTAAATCTGCGCCGCCGTCTCCGG5760.1296085865688602No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG5320.11970793065040558No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5210.11723276667079195No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG5170.11633270704184152No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC5060.11385754306222787No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)