FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926812

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926812
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences477871
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT24760.5181314622565504No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT20550.4300323727533163No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12990.2718306823389576No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12150.25425271673736216No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACC11850.24797487187964953No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT10000.2092614952570882No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT8790.18394085433098054No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8380.1753611330254399No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG8370.17515187153018283No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7930.16594436573887095No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7660.16029430536692957No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6900.14439043172739088No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC6770.14167003228904873No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA6640.13894963285070658No Hit
GACAAAGCTGAAGCACAGTCCACTCCGGAAC6530.1366477564028786No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG5910.12367354369693913No Hit
GGTCGTCAGGGCTCCGACGTCGAGCTGGAAA5780.12095314425859699No Hit
TCCCGCGTTCCGGCTAAAAAACCGCGTAAAC5570.11655865285819812No Hit
TCTCGCGTGCCGGCGAAGAAACCGCGTAAAC5070.10609557809534373No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA5020.10504927061905829No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC4850.10149182519968779No Hit

[OK]Adapter Content

Adapter graph