FastQCFastQC Report
Sun 21 May 2023
EGAF00007926816

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926816
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences486236
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT27530.5661859673080561No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT20140.4142021569772703No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12880.2648919454750368No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12870.26468628402668665No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACC12210.25111262843557447No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT10010.20586710979853406No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT9660.19866895910627763No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG9150.18818022524041822No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8660.17810281427125924No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT8270.17008201778560206No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7640.15712534653954047No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC7500.15424608626263792No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7230.14869322715718294No Hit
GACAAAGCTGAAGCACAGTCCACTCCGGAAC6620.13614787880782173No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG6230.12812708232216455No Hit
GGTCGTCAGGGCTCCGACGTCGAGCTGGAAA5990.12319120756176014No Hit
TCCCGCGTTCCGGCTAAAAAACCGCGTAAAC5980.12298554611340994No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA5850.12031194728485756No Hit
TCTCGCGTGCCGGCGAAGAAACCGCGTAAAC5430.11167416645414983No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC4940.10159675548499082No Hit

[OK]Adapter Content

Adapter graph