FastQCFastQC Report
Sun 21 May 2023
EGAF00007926836

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926836
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences479611
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG39070.8146185137538546No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC23860.49748650468817435No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18720.39031631885006807No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG15940.33235267748237635No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT15570.32463809212048933No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA13380.2789760868704012No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11240.23435659315570326No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT9940.20725129323555966No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC8920.18598405791360081No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG7490.15616822800144284No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG6710.13990504804935666No Hit
CCTCGTCGTCCGCCGCCAGGCCGTCGCCCGT6410.13364997883701582No Hit
ATGTCCAACATGGACATCGATGGTATTAACA6350.13239896499454765No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG6340.13219046268746962No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC5720.11926331964863192No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA5690.11863781272739783No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC5600.11676129196369557No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG5520.11509327350707137No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5380.11217424120797896No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG5180.1080041950664184No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG5130.10696168353102828No Hit

[OK]Adapter Content

Adapter graph