FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926858

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926858
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences466490
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG23930.5129799138245194No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21330.4572445282857082No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC12030.2578833415507299No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG5230.11211387167999314No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)