FastQCFastQC Report
Wed 31 May 2023
EGAF00007926874

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926874
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences471038
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22160.4704503670616808No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC19860.42162203474029697No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT10050.2133585825347424No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTACC7630.16198268504876465No Hit
AACGGTGACATGGCTACCGGCTGGGTGAAGGAT6490.13778081598512223No Hit
CAGGGCCGTTATACTACCAACGACGGTTACGTT5080.10784692530114344No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)