FastQCFastQC Report
Wed 31 May 2023
EGAF00007926875

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926875
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences473761
Sequences flagged as poor quality0
Sequence length41
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGT20510.43291870795612136No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATAT10370.21888673824987706No Hit
ACGAACAATCACCTTAATTGCTTTGCCGTTAACTTTAACTA7890.1665396687359238No Hit
GTTGACCCATTCGCCGTTAGCGTTAACACCATAGCCGTCAA6300.13297844271689735No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)