FastQCFastQC Report
Sun 21 May 2023
EGAF00007926877

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926877
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences477529
Sequences flagged as poor quality0
Sequence length41
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAACTGAGCCTTCACTGGTTCAGCTCCCTCGGTCGAGTAC13970.29254767773266127No Hit
GGCGCCCGCGGTTCAACCAATGGTAACACAAGAACTGAGCC10860.22742074303340737No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGG9730.20375725872145986No Hit
CGAGATGTTTCCATCCAGAGGTCTCCGCAGCGGAAAAAATT7480.15663970146315723No Hit
CGGACGCGTTGGCAGGGTCGCGCCAGTTTCGTTTGCAGTCA7180.15035736049538354No Hit
AACCCTCTTAACCGCTGTATCGGCGAGAAGCTCTTCTGAGG5830.12208682614040195No Hit
TGCTGGTTTCGCGGCCGGTTTTGCGGTCGGTTTCGCAGCCG5490.11496683971025842No Hit
CGGACGAGTCGGCAGGGTAGCACCGGTTTCGTTCGCGGTCA4820.10093627821556386No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)