FastQCFastQC Report
Wed 31 May 2023
EGAF00007926882

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926882
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences518735
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG30630.5904749052984665No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT14470.2789478249973493No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG10060.1939333185537895No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC9190.17716174925540015No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC8470.16328182983604345No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC8250.15904074334679555No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT7240.13957030082797575No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6100.11759376174732762No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTCGC5960.11489488852689718No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)