FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926884

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926884
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences506506
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG29610.584593272340308No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23370.46139631119868274No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT13970.27581114537636275No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG10440.2061179926792575No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC8950.17670076958614508No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC8140.16070885636103027No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC8040.15873454608632476No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT6660.13148906429538842No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTCGC5390.10641532380662815No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)