FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007926902

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926902
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences447859
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG25220.5631236616881652No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21800.4867603419826329No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC11500.256777244623866No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCCGT7350.16411415199873172No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT6230.1391062812179726No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)