FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007926910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences481621
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG27370.5682891734372048No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG13580.28196444922459774No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC11470.23815406720221918No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT11070.229848781510773No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC10870.2256961386650499No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT10850.22528087438047759No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG8580.17814837808152054No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACGTT8090.16797440310949896No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAACAG7770.16133017455634202No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACCAC7730.1604996459871974No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCCGT7470.1551012102877574No Hit
CAGGACAGCCTGCCGGATACCAAAGCATCTGGT7110.1476264531654558No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAACTG7040.14617302816945274No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAGAA6790.14098222461229887No Hit
CAGGGCGCGCTGACCCTGTCCCTGCCGAAACAG6430.13350746748999734No Hit
CAGGACTCTCTGCCGGACACTAAAGCCTCTGGC5890.12229533180654498No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5610.11648163182253264No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATGTA5530.11482057468424342No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCGCC5500.11419767825738496No Hit
CCGCAGCTGCAGACTACCGGTCGTCCGTCTCAC5440.11295188540366803No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTCGT5350.11108319612309263No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAGAA5320.11046029969623418No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT5020.10423133542764955No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC4950.10277791043164647No Hit
GAGAAAACGAAACAGACTCTGGCTTCTGTTTCC4950.10277791043164647No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)