FastQCFastQC Report
Wed 31 May 2023
EGAF00007926912

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926912
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences465451
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG28780.6183250223976315No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22620.4859802643027945No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG13300.2857443640683982No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC11010.23654477055586945No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT10550.2266618827760602No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC10230.21978683040749727No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT9660.20754064337599448No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACCAC8010.17209115460059168No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG7850.1686536284163102No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAACAG7650.16435672068595836No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACGTT7540.16199342143426484No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCCGT6450.13857527430384725No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAACTG6420.13793073814429443No Hit
CAGGGCGCGCTGACCCTGTCCCTGCCGAAACAG6400.13750104737125926No Hit
CAGGACAGCCTGCCGGATACCAAAGCATCTGGT6350.13642682043867133No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAGAA6040.12976661345662593No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAGAA5700.12246187031502778No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTCGT5550.11923918951726391No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATGTA5480.11773527181164074No Hit
CAGGACTCTCTGCCGGACACTAAAGCCTCTGGC5430.1166610448790528No Hit
CCGCAGCTGCAGACTACCGGTCGTCCGTCTCAC5230.11236413714870094No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCGCC5080.10914145635093704No Hit
GAGAAAACGAAACAGACTCTGGCTTCTGTTTCC4780.10269609475540926No Hit

[OK]Adapter Content

Adapter graph