FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007926918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926918
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences460998
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG15970.34642232721183175No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT13410.29089063293116235No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC12480.270717009618263No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC8640.187419468197259No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC6460.1401307597863765No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG6220.13492466344756376No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT5650.12256018464288349No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCACC5350.11605256421936755No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT5330.11561872285779982No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5270.11431719877309664No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG5060.10976186447663547No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC4750.10303732337233566No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)