FastQCFastQC Report
Sun 21 May 2023
EGAF00007926926

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926926
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences481708
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG51731.0738870851221072No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAGAA24980.5185714167088776No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21820.45297150971127736No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC20060.41643485264932284No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCCGT10940.2271085387828311No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT9910.20572629061589176No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTGGC8720.18102252817059297No Hit
ACCGAACCTACTACTGATTACGGCGGTGACTCC8140.1689820389115398No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACAAC7140.14822257467179287No Hit
GCAGTTGCGCCGGAACCAGTAGCACCGGCTCCG5940.12331121758409659No Hit
CAGGCGCCGTACCCGTCTGAGGACTCCCCGACT5940.12331121758409659No Hit
AAAATTTCCGGCAGCCAGGCATCCTCCCACACT5920.12289602829930164No Hit
ACCGCGTCCGGTGAAGAAGTAGCAGTTCTGAGC5910.12268843365690418No Hit
ATGATGGACCCGAACTCTACCAGCGAAGACGTC5820.12082008187532696No Hit
GCGGAAGTGAATGTTGACCAGGCTCACCTGGTA5350.11106313368264592No Hit
ACCGCATCCGGTGAAGAAGTAGCTGTTCTGTCC5300.11002516047065858No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT5130.1064960515499016No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCTAC5090.10566567298031172No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT4980.10338213191393955No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCGCC4950.10275934798674716No Hit

[OK]Adapter Content

Adapter graph