FastQCFastQC Report
Sun 21 May 2023
EGAF00007926934

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926934
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences466126
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTATT22910.49149800697665436No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG17740.38058379064888037No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC12090.25937192947829557No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCATT11960.2565829840000343No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5530.11863744995988208No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)